Editorials
A European initiative to ban animal research has galvanized resistance.
doi: 10.1038/521125b
India is making great strides in improving its science, but it needs to look carefully at its approach and work with the rest of the world if it is to realize its full potential.
doi: 10.1038/521125a
The UK voter opinion polls show that an anomalous answer can be the correct one.
doi: 10.1038/521126a
News
Geologists say hazard posed by earthquake-loosened earth could linger for years.
doi: 10.1038/521133a
A surprise Conservative majority and the rise of the Scottish National Party have implications for research policy.
doi: 10.1038/nature.2015.17506
Aeroplane detects signature spike in photons that does not fit any known source of antiparticles.
doi: 10.1038/521135a
DNA from microbes living on the human body can be used to identify individuals.
doi: 10.1038/521136a
Health agency’s annual meeting will address shortcomings in outbreak response highlighted by West Africa crisis.
doi: 10.1038/521137a
States begin to permit field tests of transgenic plants.
doi: 10.1038/521138a
News Features
A special issue explores the enormous potential and major challenges for research in south Asia's superpower.
doi: 10.1038/521141a
Highs and lows in the country’s research landscape.
doi: 10.1038/521142a
Despite great strides in some areas of research and development, the nation still has a long way to go.
doi: 10.1038/521144a
K. VijayRaghavan is determined to cut through red tape and build up biological science in India.
doi: 10.1038/521148a
News & Views
For most galaxies, the shutdown of star formation was a slow process that took 4 billion years. An analysis of some 27,000 galaxies suggests that 'strangulation' by their environment was the most likely cause. See Letter p.192
doi: 10.1038/521164a
An analysis reveals that fruit-fly neurons orient flies relative to cues in the insects' environment, providing evidence that the fly's brain contains a key component for drawing a cognitive map of the insect's surroundings. See Article p.186
doi: 10.1038/521165a
doi: 10.1038/521166a
A compound derived from plant cell-wall material that is a waste product of biofuel manufacture has been found to have fungicidal properties: it interacts with a carbohydrate called β1,3 glucan, thus compromising the integrity of fungal cells.
doi: 10.1038/521168a
A new archaeal phylum represents the closest known relatives of eukaryotes, the group encompassing all organisms that have nucleated cells. The discovery holds promise for a better understanding of eukaryotic origins.
doi: 10.1038/nature14522
Two new techniques identify proteins that directly interact with a non-protein-coding RNA called Xist to mediate inactivation of one X chromosome in female mammals. See Letter p.232
doi: 10.1038/521170a
Articles
This study identifies a clade of archaea that is the immediate sister group of eukaryotes in phylogenetic analyses, and that also has a repertoire of proteins otherwise characteristic of eukaryotes—proteins that would have provided the first eukaryotes with a ‘starter kit’ for the genomic and cellular complexity characteristic of the eukaryotic cell.
doi: 10.1038/nature14447
Cell-type-specific electrical activity manipulations and deep-brain imaging in mice of neuronal populations associated with homeostasis of nutrient or fluid intake reveals that learning is conditioned by a negative-valence signal from the hunger-mediating AGRP neurons and also from the thirst-mediating neurons in the subfornical organ.
doi: 10.1038/nature14416
Calcium imaging of the brain of tethered flies walking in a virtual reality arena showed that a population of neurons with dendrites that tile the ‘ellipsoid body’ use information from visual landmarks and the fly's own rotation to compute heading; this suggests insects possess neurons with similarities to ‘head direction cells’ known to contribute to spatial navigation in mammalian brains.
doi: 10.1038/nature14446
Letters
An analysis of the stellar metallicity of local galaxies reveals that strangulation (halting of cold gas supply) rather than sudden removal of gas (through outflows or stripping) is the primary mechanism responsible for the quenching of star formation.
doi: 10.1038/nature14439
Evidence is presented for electron pairing in strontium titanate far above the superconducting transition temperature; such pairs are thought to be the long-sought pre-formed pairs that condense at lower temperatures to give rise to the unconventional superconducting state in this system.
doi: 10.1038/nature14398
The coherent manipulation of electron quantum states using light, commonly employed in atoms and molecules, is extended to the case of free electron beams using ultrafast transmission electron microscopy; this approach may enable a range of applications in ultrafast electron imaging and spectroscopy down to attosecond precision.
doi: 10.1038/nature14463
Particulate organic carbon export from the terrestrial biosphere is primarily controlled by physical erosion, and tectonic and climatic forcing of physical erosion may favour biospheric particulate organic carbon sequestration over silicate weathering as a long-term atmospheric carbon dioxide sink.
doi: 10.1038/nature14400
A multi-omics approach, integrating metagenomics, metatranscriptomics and metaproteomics, determines the phylogenetic composition of the microbial community and assesses its functional potential and activity along a thaw transition from intact permafrost to thermokast bog.
doi: 10.1038/nature14238
In Arabidopsis thaliana, pathogen-secreted proteases trigger a previously unknown defence response involving heterotrimeric G-protein complexes upstream of a mitogen-activated protein kinase cascade.
doi: 10.1038/nature14243
D’Arcy Thompson predicted a century ago that animal body shape is conditioned by gravity, but there has been no animal model to study how cellular forces are coordinated to generate body shapes that withstand gravity; the hirame medaka fish mutant, with pronounced body flattening, reveals how the hirame/YAP gene controls gravity-resisting cellular forces to produce complex 3D organs and body shapes.
doi: 10.1038/nature14215
A proof-of-concept phase I clinical trial demonstrates that targeting interleukin (IL)-23 with an antibody that binds to the p19 subunit leads to clinical improvement of disease in patients with moderate to severe psoriasis.
doi: 10.1038/nature14175
HIV-1 integration into the host cell genome occurs in the outer shell of the nucleus in close correspondence with the nuclear pore, in which a series of cellular genes are preferentially targeted by the virus.
doi: 10.1038/nature14226
The mechanisms by which Xist, a long non-coding RNA, silences one X chromosome in female mammals are unknown; here a mass spectrometry-based approach is developed to identify several proteins that interact directly with Xist, including the transcriptional repressor SHARP that is required for transcriptional silencing through the histone deacetylase HDAC3.
doi: 10.1038/nature14443
ATP, the universal energy currency of cells, is produced by F-type ATP synthases, which are ancient, membrane-bound nanomachines. F-type ATP synthases use the energy of a transmembrane electrochemical gradient to generate ATP by rotary catalysis. Protons moving across the membrane drive a rotor ring composed of 8–15 c-subunits. A central stalk transmits the rotation of the c-ring to the catalytic F1 head, where a series of conformational changes results in ATP synthesis. A key unresolved question in this fundamental process is how protons pass through the membrane to drive ATP production. Mitochondrial ATP synthases form V-shaped homodimers in cristae membranes. Here we report the structure of a native and active mitochondrial ATP synthase dimer, determined by single-particle electron cryomicroscopy at 6.2 Å resolution. Our structure shows four long, horizontal membrane-intrinsic α-helices in the a-subunit, arranged in two hairpins at an angle of approximately 70° relative to the c-ring helices. It has been proposed that a strictly conserved membrane-embedded arginine in the a-subunit couples proton translocation to c-ring rotation. A fit of the conserved carboxy-terminal a-subunit sequence places the conserved arginine next to a proton-binding c-subunit glutamate. The map shows a slanting solvent-accessible channel that extends from the mitochondrial matrix to the conserved arginine. Another hydrophilic cavity on the lumenal membrane surface defines a direct route for the protons to an essential histidine–glutamate pair. Our results provide unique new insights into the structure and function of rotary ATP synthases and explain how ATP production is coupled to proton translocation.
doi: 10.1038/nature14185
Electron cryomicroscopy shows structures of three distinct rotational states of the V-ATPase from Saccharomyces cerevisiae.
doi: 10.1038/nature14365