Editorials
A slowdown in new cases offers a chance for control efforts to get ahead of the epidemic.
doi: 10.1038/515465b
The US–China emissions agreement raises hopes for international cooperation on a climate accord. But it does not go far enough.
doi: 10.1038/515465a
A crowdfunded lunar mission might seem like a long shot — but there is no harm in trying.
doi: 10.1038/515466a
News
But challenges remain for United Nations meeting in run-up to a new 2015 emissions treaty.
doi: 10.1038/515473a
Problems with data management challenge US effort to monitor seas in real time.
doi: 10.1038/515474a
Robotic limb advances are attracting serious attention from the FDA.
doi: 10.1038/515476a
US agencies propose expanded reporting of drug-test data.
doi: 10.1038/515477a
The Public Library of Science’s open-data mandate has prompted scientists to share more data online, but not everyone is complying with the regulations.
doi: 10.1038/515478a
Local government’s closure of gift shop could doom Charles Darwin Foundation.
doi: 10.1038/515479a
News Features
When a handful of authors were caught reviewing their own papers, it exposed weaknesses in modern publishing systems. Editors are trying to plug the holes.
doi: 10.1038/515480a
NASA has 35 kilograms of plutonium-238 to power its deep-space missions — but that will not get it very far.
doi: 10.1038/515484a
News & Views
A study of the El Niño phenomenon over the past 21,000 years suggests that El Niño responded in complex ways to a changing climate, with several competing factors playing a part in its varying strength. See Letter p.550
doi: 10.1038/515494a
A newly discovered skull from the Cretaceous period belongs to a mammal that was big, strange and fast-moving. The fossil solves a long-standing mystery, and helps to resolve a controversy about mammalian evolution. See Article p.512
doi: 10.1038/nature13940
Five papers extend the list of cancers that respond to therapies that restore antitumour immunity by blocking the PD-1 pathway, and characterize those patients who respond best. See Letters p.558, p.563, p.568, p.572 & p.577
doi: 10.1038/515496a
A geometric measurement of the distance to a nearby galaxy implies a larger mass for its central black hole than previously calculated, and a consequent increase for most other masses of such black holes. See Letter p.528
doi: 10.1038/515498a
An analysis of fruit-fly embryos reveals that receptor proteins of the Toll family direct the oriented cell rearrangements required for the elongation of the head-to-tail axis during development. See Article p.523
doi: 10.1038/nature13937
Are you wondering what to prepare for dinner tonight? Data analyses reveal that certain food choices greatly benefit both your health and the environment. But what to do with this evidence remains a challenge to society. See Article p.518
doi: 10.1038/nature13943
During immune-cell development, potentially self-reactive T cells are eliminated. It emerges that recruitment of a co-receptor bound to the T-cell receptor by the enzyme Lck is the rate-limiting step in this negative selection.
doi: 10.1038/515502a
Review
Growing evidence points to belowground biota as a significant contributor to aboveground diversity and functioning as well as impacting eco-evolutionary responses to environmental change; this review explores such evidence and proposes further research directions.
doi: 10.1038/nature13855
Articles
The gondwanatherians were mammals known only from teeth and some jaw fragments that lived in the southern continents alongside dinosaurs; here the entire cranium of a bizarre and badger-sized fossil mammal from the Cretaceous of Madagascar shows that gondwanatherians were related to the better-known multituberculates, a long-lived and successful group of now-extinct rodent-like mammals.
doi: 10.1038/nature13922
As incomes grow, diets change, with varying impacts on human health and the environment; here the links are examined and suggestions made for diets that both improve health and minimize environmental impacts.
doi: 10.1038/nature13959
Body axis elongation from head to tail is essential for animal development, however, the spatial cues that direct cell rearrangements relative to the anterior–posterior axis were unknown; this Drosophila study of convergent extension reveals that three Toll family receptors, expressed in overlapping stripes, modulate the contractile properties of cells to generate the polarized cell rearrangements that lead to body axis elongation.
doi: 10.1038/nature13953
Letters
The active galaxy NGC 4151 has a crucial role as one of only two active galactic nuclei for which black hole mass measurements based on emission line reverberation mapping can be calibrated against other dynamical techniques. Unfortunately, effective calibration requires accurate knowledge of the distance to NGC 4151, which is not at present available. Recently reported distances range from 4 to 29 megaparsecs. Strong peculiar motions make a redshift-based distance very uncertain, and the geometry of the galaxy and its nucleus prohibit accurate measurements using other techniques. Here we report a dust-parallax distance to NGC 4151 of megaparsecs. The measurement is based on an adaptation of a geometric method that uses the emission line regions of active galaxies. Because these regions are too small to be imaged with present technology, we use instead the ratio of the physical and angular sizes of the more extended hot-dust emission as determined from time delays and infrared interferometry. This distance leads to an approximately 1.4-fold increase in the dynamical black hole mass, implying a corresponding correction to emission line reverberation masses of black holes if they are calibrated against the two objects with additional dynamical masses.
doi: 10.1038/nature13914
Analysis of data obtained by probe spacecraft shows that ultrarelativistic electrons in the Van Allen radiation belts are prevented from entering a sharply defined region around the Earth, possibly owing to a combination of slow natural inward diffusion and pitch angle scattering.
doi: 10.1038/nature13956
X-ray and neutron scattering measurements and ab initio molecular dynamics calculations show that the transition from an insulating phase to a metallic phase in vanadium dioxide is driven primarily by the entropic effects of soft anharmonic lattice vibrations, or phonons, which stabilize the metallic phase.
doi: 10.1038/nature13865
A multilayer photonic structure is described that strongly reflects incident sunlight while emitting heat selectively through an atmospheric transparency window to outer space; this leads to passive cooling under direct sunlight of 5 degrees Celsius below ambient air temperature, which has potential applications in air-conditioning and energy efficiency.
doi: 10.1038/nature13883
Flash memories are essential for modern electronics; here a selenium-templated polyoxometalate is used to engineer new metal–oxide–semiconductor devices.
doi: 10.1038/nature13951
A simulation of the evolution of El Niño Southern Oscillation in the past 21,000 years in a state-of-the-art climate model shows the complex response mechanisms of El Niño to external climate forcings and poses further challenges to our understanding and projection of El Niño in the future.
doi: 10.1038/nature13963
Single-molecular-interaction-sequencing involves attaching DNA barcodes to proteins, assaying these barcoded proteins en masse in an aqueous solution, followed by immobilization in a polyacrylamide film and amplifying and analysing the barcoding DNAs—the method allows for precise protein quantification and simultaneous interrogation of molecular binding affinity and specificity.
doi: 10.1038/nature13761
The results of a clinical phase I study in metastatic urothelial bladder cancer treated with the MPDL3280A antibody show that expression of PD-L1 on tumour-infiltrating immune cells is relevant for the therapeutic response.
doi: 10.1038/nature13904
Clinical and correlative biomarker results from a phase 1 clinical trial in patients with different solid tumours are presented; the findings indicate that PD-L1 expression on tumour-infiltrating immune cells is associated with clinical response to MPDL3280A (anti-PD-L1).
doi: 10.1038/nature14011
The dynamics of T-cell responses are investigated in tumour tissue from patients with advanced melanoma who were treated with a PD-1-blocking monoclonal antibody, revealing that clinical efficacy of the treatment correlates with increased frequencies of pre-existing CD8+ T cells and PD-1 and PD-L1 expression.
doi: 10.1038/nature13954
A combination of genome-wide exome and transcriptome analysis, mass spectrometry and computational structural modelling are used here to identify immunogenic neo-antigens in two mouse tumour cancer cell lines; mice vaccinated with predicted immunogenic peptides yielded therapeutically useful cytotoxic T-lymphocyte responses.
doi: 10.1038/nature14001
A carcinogen-induced mouse tumour model is used here to show that mutant tumour-specific antigens are targets for CD8+ T-cell responses, mediating tumour regression after checkpoint blockade immunotherapy, and that these antigens can be used effectively in therapeutic vaccines; this advance potentially opens the door to personalized cancer vaccines.
doi: 10.1038/nature13988
The authors identify a specific histone variant as a memory-suppressor that is initially reduced in expression within the hippocampus during memory formation; as a memory is consolidated to the cortex, reduced histone association with specific plasticity genes is observed, promoting stabilization of the memory.
doi: 10.1038/nature13707
The Arabidopsis thaliana floral repressor FLC is epigenetically silenced by prolonged cold in a process called vernalization and then is reactivated before the completion of seed development; a histone demethylase, ELF6, is now shown to be involved in reactivating FLC in reproductive tissues, allowing the resetting of FLC expression and thus the requirement for vernalization in each generation.
doi: 10.1038/nature13722
To prime reverse transcription of Moloney murine leukaemia virus, a transfer RNA molecule must bind two regions of the retroviral RNA, the primer binding site (PBS) and primer activation signal within the U5-PBS; here, the NMR structures of the U5-PBS RNA and tRNA primer are solved, with and without the retroviral nucleocapsid protein, which remodels these regions.
doi: 10.1038/nature13709